Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892118.1_cds_XP_016447017.1_41820
CDS Infomation

[gene=LOC107772047] [db_xref=GeneID:107772047] [protein=uncharacterized protein LOC107772047 isoform X2] [protein_id=XP_016447017.1] [location=complement(join(24716..24802,24909..26821,27096..27180))] [gbkey=CDS]
Sequence

ATGGATGGTATTACTCCTCGGAAAGCAACTCCACCGCTGAGCTCTCCTAACAAGCCTTCT
GCTGTTCCAGATCGTTCTCTTTCTGGGTCAAGAGAAACGAATGAAAATGACCAGCCGCTT
GTTCAGAAATCCTTGACTAAGAATTTCATGTCACCTACCATATCTGCAGCTTCTAAAGCT
TCAGTTCCAATTAGAAAGAAAATTTTAGCCGAAAGGAATGAAATTTCCAGCTCCTACGAA
AGCCATCCTCAGAACAAAGCCTCAAATCTTGGGTCTAAAACCAGTTCCCTCAATTCAACT
TCTCATCATCGTTCTGGGAAATTACCTATTTCTAATTCCTACAGTTATGCCTCTGAATCT
GATGATGACCAAGAAAACAACTTTGTTGTTGATTCATCCTATAAGCCTTACGACCCTCTC
ACTAATGACCTCGGCCCTAGGCCTAAGTATCTACGTTACAAGCCAAATAGGCGTCGACCG
ATCATTCTTGATTCAAATCAAGAAATCAAACAAGGCGATTCTCAGGAATCTGATGATAAT
GAAGGGTCATTGGAGCAAGTTCAAGATTCCTCAAATCTTCCAGAAAAACATAGTAATTTG
GAGGCAGAAACTGAAGAAGATGGGGATAATAGTGTTCATGAGGATGATGAAGAAATGGAA
GTTGTGGAAGGAAAATGGGGTCTAAAAGAACTATTCAAAATTTTGCTTCTATTTGTTTTC
TTCTTTTCAGGATCAAATTTATCTTCCATGAACTCTATGGTGACTTCTGACAATGGCGGC
ATGATTCGAAAGAACATCTTTGAAGCTGTTTTGCATGAAATTTATGGGAGTGGAAGTGTA
CATGCGGAGCAGCTAGAGTACTCTCAAAGTGGTTTTCTGGAGTTGAGTCAAAGGGGGACT
AGTATTGAACTCAAGGCAGTTGAATTCGTTGAAGATGTTGTAGTGGGGTTCTTGAATGTG
GAAAGCGCCGATATTGAAAAAACTAGTGCAGATATTGATATTGAACAGGACAACACAGTG
GTTAATGTTACTGATCAAAGTGTACATGGTGATGAAGAGGAGGAAACCATGTCAATAGCT
GCTGCTGGTGAAGTTACTAGTTCCAATGAGGTAGATGAGGAAGAAGTTGAAGATTTTCAT
GAGCAACTGCAGAAGGATCAAGTTCTTGAGAAGGACTCTAACCAAGATGAGGAAATCATG
TCAAAAGCTGCTGGTGAAGTTACTAGTTCCAATGAAGTGAATGAAGAAGAAGTTGAGCCA
TTGCTTGATGACATTTCAAGTACTTCTGCCAACGTGCAATGTGCTGCTCAGTCGAGTTAC
AAATTTGAGCAAGCAGAAGCTGCTTACAATGTTGAGCAGGTGGAGGAAATCTCTGTAGAT
GAAGAATTAACTGAGACAGAATTTAAAGTAACTGAAGTAATTGACACAGAATATGAAACC
AGTAATATTGACATTGAATTAGAGTCAAAGAATGCTGAAACCAAAGAAACTGGATTGAAT
GATGCAGTTATTGTCATTGGAGTTTCTGCATTGTCAGTGCTTTTAGTGACATCTTTGGTT
ACCATCTATATTTCAAGGAAAGTAAGAGCTGCTATTGAAACTCCTCAAGCTGGGACATTC
AATGTCTTAGAGGAGAAAAATGAAACTTGTGTTGTAAAGGTTTCATCTTTGAGTGACCCT
TCAGAAAATCTCAGAAACTTTACTCAGCTTGAGAGAACACCTGCCATTAGATCCATTACA
GCAGCTTCGTCTTTGTTTGGTCCAAAGGGAGAAGCATCAAAAGAGATTAGTCAAATCAGC
GCTCCAAGTATTGAACTGCTAGGGGAAATGGTACTTGAAGAAGTCAGCAGCAGCTCCCTC
AGAAGTTATGTTAGGAAAAACAACACTATTGAAGCAGAAGAGAACAGCAACACTAATGTA
TATGTTGTGGATCACTCTAAAGCAGATTCTGCATCATATGGAAGCTTTACAGCTGAAAAG
AAGATCATCAAGAAAAAGGTGGAGAAAGATGGAGAAGAGATCAAGAAGATGGTGTTGACA
ACCCCAGTTAGGCGTTCAAGTCGAATTGCTGCAATGTCCCCTTGA

Peptide Sequence

PEP ID

XP_016447017.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107772047 isoform X2 [Nicotiana tabacum]
Sequence

MDGITPRKATPPLSSPNKPSAVPDRSLSGSRETNENDQPLVQKSLTKNFMSPTISAASKA
SVPIRKKILAERNEISSSYESHPQNKASNLGSKTSSLNSTSHHRSGKLPISNSYSYASES
DDDQENNFVVDSSYKPYDPLTNDLGPRPKYLRYKPNRRRPIILDSNQEIKQGDSQESDDN
EGSLEQVQDSSNLPEKHSNLEAETEEDGDNSVHEDDEEMEVVEGKWGLKELFKILLLFVF
FFSGSNLSSMNSMVTSDNGGMIRKNIFEAVLHEIYGSGSVHAEQLEYSQSGFLELSQRGT
SIELKAVEFVEDVVVGFLNVESADIEKTSADIDIEQDNTVVNVTDQSVHGDEEEETMSIA
AAGEVTSSNEVDEEEVEDFHEQLQKDQVLEKDSNQDEEIMSKAAGEVTSSNEVNEEEVEP
LLDDISSTSANVQCAAQSSYKFEQAEAAYNVEQVEEISVDEELTETEFKVTEVIDTEYET
SNIDIELESKNAETKETGLNDAVIVIGVSALSVLLVTSLVTIYISRKVRAAIETPQAGTF
NVLEEKNETCVVKVSSLSDPSENLRNFTQLERTPAIRSITAASSLFGPKGEASKEISQIS
APSIELLGEMVLEEVSSSSLRSYVRKNNTIEAEENSNTNVYVVDHSKADSASYGSFTAEK
KIIKKKVEKDGEEIKKMVLTTPVRRSSRIAAMSP

Transcript Sequence

Gene sequence data has not been registered.